| auditory | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| trial_type | subject | session | left/noise | left/tone/2500 | left/tone/4000 | left/tone/500 | right/noise | right/tone/2500 | right/tone/4000 | right/tone/500 | |
| mind002 | 01 | 99 | 108 | 100 | 109 | 119 | 105 | 106 | 104 | ||
1 rows × 10 columns
| General | ||
|---|---|---|
| Filename(s) | sub-mind002_ses-01_task-auditory_ave.fif | |
| MNE object type | Evoked | |
| Measurement date | 1912-10-26 at 16:30:04 UTC | |
| Participant | sub-mind002 | |
| Experimenter | mne_anonymize | |
| Acquisition | ||
| Aggregation | average of 1 epochs | |
| Condition | Grand average: 0.29 × left/noise + 0.24 × left/tone/2500 + 0.15 × left/tone/4000 + 0.32 × left/tone/500 | |
| Time range | -0.200 – 0.500 s | |
| Baseline | -0.200 – 0.000 s | |
| Sampling frequency | 1250.00 Hz | |
| Time points | 876 | |
| Channels | ||
| Magnetometers | ||
| Gradiometers | ||
| Head & sensor digitization | 136 points | |
| Filters | ||
| Highpass | 1.00 Hz | |
| Lowpass | 40.00 Hz | |
| Projections |
PCA-v1 (on)
PCA-v2 (on) PCA-v3 (on) planar-ECG--0.500-0.500)-PCA-01 (on) axial-ECG--0.500-0.500)-PCA-01 (on) |
|
| General | ||
|---|---|---|
| Filename(s) | sub-mind002_ses-01_task-auditory_ave.fif | |
| MNE object type | Evoked | |
| Measurement date | 1912-10-26 at 16:30:04 UTC | |
| Participant | sub-mind002 | |
| Experimenter | mne_anonymize | |
| Acquisition | ||
| Aggregation | average of 1 epochs | |
| Condition | Grand average: 0.27 × right/noise + 0.18 × right/tone/2500 + 0.29 × right/tone/4000 + 0.27 × right/tone/500 | |
| Time range | -0.200 – 0.500 s | |
| Baseline | -0.200 – 0.000 s | |
| Sampling frequency | 1250.00 Hz | |
| Time points | 876 | |
| Channels | ||
| Magnetometers | ||
| Gradiometers | ||
| Head & sensor digitization | 136 points | |
| Filters | ||
| Highpass | 1.00 Hz | |
| Lowpass | 40.00 Hz | |
| Projections |
PCA-v1 (on)
PCA-v2 (on) PCA-v3 (on) planar-ECG--0.500-0.500)-PCA-01 (on) axial-ECG--0.500-0.500)-PCA-01 (on) |
|
"""ds004107: MIND DATA.
See [OpenNeuro](https://openneuro.org/datasets/ds004107) for more information.
```
M.P. Weisend, F.M. Hanlon, R. Montaño, S.P. Ahlfors, A.C. Leuthold,
D. Pantazis, J.C. Mosher, A.P. Georgopoulos, M.S. Hämäläinen, C.J.
Aine,, V. (2007).
Paving the way for cross-site pooling of magnetoencephalography (MEG) data.
International Congress Series, Volume 1300, Pages 615-618.
```
"""
# This has auditory, median, indx, visual, rest, and emptyroom but let's just
# process the auditory (it's the smallest after rest)
bids_root = "~/mne_data/ds004107"
deriv_root = "~/mne_data/derivatives/mne-bids-pipeline/ds004107"
subjects = ["mind002"]
sessions = ["01"]
conditions = ["left", "right"] # there are also tone and noise
task = "auditory"
ch_types = ["meg"]
crop_runs = (0, 120) # to speed up computations
spatial_filter = "ssp"
l_freq = 1.0
h_freq = 40.0
report_image_format = dict(raster="png")
Platform Linux-7.0.0-1004-aws-x86_64-with-glibc2.43 (X11)
Python 3.14.4 (main, May 12 2026, 13:57:53) [GCC 15.2.0]
Executable /home/circleci/python_env/bin/python3
CPU AMD EPYC 9R45 (2 cores)
Memory 7.6 GiB
Core
├☑ mne 1.13.0.dev325+g166e95903 (development, latest release is 1.12.1)
├☑ numpy 2.5.2 (OpenBLAS 0.3.34.0.0 with 2 threads via pthreads)
├☑ scipy 1.18.1
└☑ matplotlib 3.11.1 (backend=agg)
Numerical (optional)
├☑ scikit-learn 1.9.0
├☑ threadpoolctl 3.6.0
├☑ numba 0.67.0
├☑ nibabel 5.4.2
├☑ pandas 3.0.5
├☑ h5io 0.2.5
├☑ h5py 3.16.0
└☐ unavailable nilearn, dipy, openmeeg, python-picard, jamica, cupy
Visualization (optional)
├☑ pyvista 0.48.4 (OpenGL 4.5 (Core Profile) Mesa 26.0.8-1ubuntu0.3 via llvmpipe (LLVM 21.1.8, 256 bits))
├☑ pyvistaqt 0.13.0
├☑ vtk 9.6.2
├☑ qtpy 2.4.3 (PySide6=6.11.2)
└☐ unavailable ipympl, pyqtgraph, mne-qt-browser, ipywidgets, trame, trame_client, trame_server, trame_pyvista, trame_vtk, trame_vuetify
Ecosystem (optional)
├☑ mne-bids 0.20.0.dev38+g6784b4c8e
├☑ mne-icalabel 0.9.0
├☑ mne-bids-pipeline 1.11.0.dev74+g91c2e0677
├☑ autoreject 0.5.0
├☑ eeglabio 0.1.3
├☑ edfio 0.4.16
├☑ curryreader 0.1.2
├☑ mffpy 0.11.0
├☑ pybv 0.8.1
├☑ defusedxml 0.7.1
└☐ unavailable mne-nirs, mne-features, mne-connectivity, neo, pymef, antio