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ds003775: Resting-state EEG.

SRM Resting State EEG Dataset. See OpenNeuro for more information.

Demonstrated features

Feature This example
MEG processing ❌
EEG processing ✅
Maxwell filter ❌
Frequency filter ✅
Artifact regression ❌
SSP ❌
ICA ❌
Evoked contrasts ❌
Time-by-time decoding ❌
Time-generalization decoding ❌
CSP decoding ❌
Time-frequency analysis ❌
BEM surface creation ❌
Template MRI ❌
Dask ❌

Dataset source

This dataset was acquired from https://openneuro.org/datasets/ds003775

How to download this dataset

Run in your terminal:

Run in your terminal
openneuro-py download \
             --dataset=ds003775 \
             --include=sub-010 \
             --exclude=sub-010/ses-t1/sub-010_ses-t1_scans.tsv

Note that we have to explicitly exclude files due to a problem with OpenNeuro's storage.

Configuration

Click to expand
Python
bids_root = "~/mne_data/ds003775"
deriv_root = "~/mne_data/derivatives/mne-bids-pipeline/ds003775"

ignore_warnings = [
    r"Unable to map the following column\(s\)",  # metadata
]

subjects = ["010"]

reader_extra_params = {"units": "uV"}

sessions = ["t1"]

run_source_estimation = False

ch_types = ["eeg"]

baseline = None
reject = None
spatial_filter = None

h_freq = 40
l_freq = None

task = "resteyesc"
task_is_rest = True
epochs_tmin = 0.0
epochs_tmax = 10.0
rest_epochs_overlap = 0.0
rest_epochs_duration = 10.0
baseline = None

parallel_backend = "loky"
dask_open_dashboard = True

log_level = "info"

n_jobs = 1

report_image_format = dict(raster="png")

Generated output

Summary reports

sub-010_ses-t1_report.html