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OMEGA Resting State Sample Data

Demonstrated features

Feature This example
MEG processing
EEG processing
Maxwell filter
Frequency filter
Artifact regression
SSP
ICA
Evoked contrasts
Time-by-time decoding
Time-generalization decoding
CSP decoding
Time-frequency analysis
BEM surface creation
Template MRI

Dataset source

This dataset was acquired from https://openneuro.org/datasets/ds000247

How to download this dataset

Run in your terminal:

Run in your terminal
openneuro-py download \
             --dataset=ds000247 \
             --include=sub-0002/ses-01/meg

Configuration

Click to expand
Python
.

import numpy as np

bids_root = "~/mne_data/ds000247"
deriv_root = "~/mne_data/derivatives/mne-bids-pipeline/ds000247"

subjects = ["0002"]
sessions = ["01"]
task = "rest"
task_is_rest = True

crop_runs = (0, 100)  # to speed up computations

ch_types = ["meg"]
spatial_filter = "ssp"

l_freq = 1.0
h_freq = 40.0

rest_epochs_duration = 10
rest_epochs_overlap = 0

epochs_tmin = 0
baseline = None

time_frequency_conditions = ["rest"]
time_frequency_freq_min = 1.0
time_frequency_freq_max = 30.0
time_frequency_cycles = np.arange(time_frequency_freq_min, time_frequency_freq_max) / 4
time_frequency_subtract_evoked = True

Generated output

Summary reports

sub-0002_ses-01_task-rest_report.html