mne.morph_labels

mne.morph_labels(labels, subject_to, subject_from=None, subjects_dir=None, surf_name='white', verbose=None)

Morph a set of labels.

This is useful when morphing a set of non-overlapping labels (such as those obtained with read_labels_from_annot()) from one subject to another.

Parameters

labelslist

The labels to morph.

subject_tostr

The subject to morph labels to.

subject_fromstr | None

The subject to morph labels from. Can be None if the labels have the .subject property defined.

subjects_dirstr | pathlib.Path | None

The path to the directory containing the FreeSurfer subjects reconstructions. If None, defaults to the SUBJECTS_DIR environment variable.

surf_namestr

Surface used to obtain vertex locations, e.g., ‘white’, ‘pial’.

verbosebool | str | int | None

Control verbosity of the logging output. If None, use the default verbosity level. See the logging documentation and mne.verbose() for details. Should only be passed as a keyword argument.

Returns

labelslist

The morphed labels.

See also

read_labels_from_annot

mne.Label.morph

Notes

This does not use the same algorithm as Freesurfer, so the results morphing (e.g., from 'fsaverage' to your subject) might not match what Freesurfer produces during recon-all.

New in version 0.18.

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