Examples#

The examples gallery provides working code samples demonstrating various analysis and visualization techniques.

Each example includes a binder link at the base of the page. Clicking on the binder link will allow you to run the example code in your browser, upload data, visualise output, all without downloading any code to your computer.

Warning

These examples sometimes use simulations or shortcuts (such as intentionally adding noise to recordings) to illustrate a point. Use caution when copy-pasting code samples.

Analysis examples#

Importing Data From fNIRS Devices

Importing Data From fNIRS Devices

Example Datasets

Example Datasets

Read Gowerlabs LUMO data

Read Gowerlabs LUMO data

GLM Analysis (Simulated)

GLM Analysis (Simulated)

GLM Analysis (Measured)

GLM Analysis (Measured)

Group Level GLM Analysis

Group Level GLM Analysis

GLM FIR Analysis

GLM FIR Analysis

GLM and Design Matrix Parameters

GLM and Design Matrix Parameters

Waveform Averaging Analysis

Waveform Averaging Analysis

Group Level Waveform Analysis

Group Level Waveform Analysis

SNIRF Support in MNE

SNIRF Support in MNE

Signal Enhancement Techniques

Signal Enhancement Techniques

Artifact Correction Techniques

Artifact Correction Techniques

Signal Quality Evaluation

Signal Quality Evaluation

Frequency and Filter Commentary

Frequency and Filter Commentary

Mayer Wave Parametrisation

Mayer Wave Parametrisation

Decoding Analysis

Decoding Analysis

Utilising Auxiliary Data

Utilising Auxiliary Data

Utilising Anatomical Information

Utilising Anatomical Information

Save and load GLM results

Save and load GLM results

Importance of Controls and Parameter Selection

Importance of Controls and Parameter Selection

Migrating from other software packages#

Migrating from Homer to MNE

Migrating from Homer to MNE

Migrating from nirs-toolbox to MNE

Migrating from nirs-toolbox to MNE

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