mne.simulation.metrics.region_localization_error#
- mne.simulation.metrics.region_localization_error(stc_true, stc_est, src, threshold='90%', per_sample=True)[source]#
Compute region localization error (RLE) between 2 source estimates.
\[RLE = \frac{1}{2Q}\sum_{k \in I} \min_{l \in \hat{I}}{||r_k - r_l||} + \frac{1}{2\hat{Q}}\sum_{l \in \hat{I}} \min_{k \in I}{||r_k - r_l||}\]where \(I\) and \(\hat{I}\) denote respectively the original and estimated indexes of active sources, \(Q\) and \(\hat{Q}\) are the numbers of original and estimated active sources. \(r_k\) denotes the position of the k-th source dipole in space and \(||\cdot||\) is an Euclidean norm in \(\mathbb{R}^3\).
- Parameters:
- stc_trueinstance of (Vol|Mixed)SourceEstimate
The source estimates containing correct values.
- stc_estinstance of (Vol|Mixed)SourceEstimate
The source estimates containing estimated values e.g. obtained with a source imaging method.
- srcinstance of
SourceSpaces The source space on which the source estimates are defined.
- threshold
float|str The threshold to apply to source estimates before computing the dipole localization error. If a string the threshold is a percentage and it should end with the percent character.
- per_sample
bool If True the metric is computed for each sample separately. If False, the metric is spatio-temporal.
- Returns:
Notes
Papers [1] and [2] use term Dipole Localization Error (DLE) for the same formula. Paper [3] uses term Error Distance (ED) for the same formula. To unify the terminology and to avoid confusion with other cases of using term DLE but for different metric [4], we use term Region Localization Error (RLE).
New in version 1.2.
References
