MRI Processing#
Step by step instructions for using gui.coregistration()
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Estimate fiducials for a subject. |
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Estimate the head->mri transform from fsaverage fiducials. |
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Read fiducials from a fiff file. |
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Write fiducials to a fiff file. |
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Get regions of interest near channels from a Freesurfer parcellation. |
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Coregister an MRI with a subject's head shape. |
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Locate intracranial electrode contacts. |
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Create an average brain subject for subjects without structural MRI. |
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Convert pos from head coordinate system to MNI ones. |
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Convert pos from head coordinate system to MRI ones. |
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Read a Freesurfer-formatted LUT. |
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Read a Freesurfer linear transform array file. |
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Compute MRI-to-MNI transform from FreeSurfer talairach.xfm file. |
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Create a scaled copy of an MRI subject. |
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Scale a bem file. |
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Scale labels to match a brain that was previously created by scaling. |
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Scale a source space for an mri created with scale_mri(). |
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Apply volume registration. |
Align two volumes using an affine and, optionally, SDR. |
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Convert the array of vertices for a hemisphere to MNI coordinates. |
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Warp a montage to a template with image volumes using SDR. |
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Class for MRI<->head coregistration. |