mne.get_volume_labels_from_aseg

mne.get_volume_labels_from_aseg(mgz_fname, return_colors=False, atlas_ids=None)

Return a list of names and colors of segmented volumes.

Parameters

mgz_fnamestr

Filename to read. Typically aseg.mgz or some variant in the freesurfer pipeline.

return_colorsbool

If True returns also the labels colors.

atlas_idsdict | None

A lookup table providing a mapping from region names (str) to ID values (int). Can be None to use the standard Freesurfer LUT.

New in version 0.21.0.

Returns

label_nameslist of str

The names of segmented volumes included in this mgz file.

label_colorslist of str

The RGB colors of the labels included in this mgz file.

See also

read_freesurfer_lut

Notes

Changed in version 0.21.0: The label names are now sorted in the same order as their corresponding values in the MRI file.

New in version 0.9.0.

Examples using mne.get_volume_labels_from_aseg

Visualize source time courses (stcs)

mne.get_meg_helmet_surf mne.get_volume_labels_from_src