Assemble summary SourceEstimate from spatiotemporal cluster results.
This helps visualizing results from spatio-temporal-clustering permutation tests.
tuple
The output from clustering permutation tests.
float
The significance threshold for inclusion of clusters.
float
The time step between samples of the original STC
, in seconds (i.e., 1 / stc.sfreq
). Defaults
to 1
, which will yield a colormap indicating cluster duration
measured in samples rather than seconds.
float
| int
The time of the first sample.
str
The name of the subject.
list
of array
| instance of SourceSpaces
| None
The vertex numbers associated with the source space locations. Defaults
to None. If None, equals [np.arange(10242), np.arange(10242)]
.
Can also be an instance of SourceSpaces to get vertex numbers from.
Changed in version 0.21: Added support for SourceSpaces.
SourceEstimate
A summary of the clusters. The first time point in this SourceEstimate
object is the summation of all the clusters. Subsequent time points
contain each individual cluster. The magnitude of the activity
corresponds to the duration spanned by the cluster (duration units are
determined by tstep
).
Changed in version 0.21: Added support for volume and mixed source estimates.
mne.stats.summarize_clusters_stc
#Permutation t-test on source data with spatio-temporal clustering
2 samples permutation test on source data with spatio-temporal clustering
Repeated measures ANOVA on source data with spatio-temporal clustering