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Documentation
API Reference
Get help
Development
Choose version
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Forum
GitHub
Section Navigation
Most-used classes
mne.io.Raw
mne.Epochs
mne.Evoked
mne.Info
Reading raw data
mne.io.anonymize_info
mne.io.read_raw
mne.io.read_raw_artemis123
mne.io.read_raw_bti
mne.io.read_raw_cnt
mne.io.read_raw_ctf
mne.io.read_raw_curry
mne.io.read_raw_edf
mne.io.read_raw_eyelink
mne.io.read_raw_bdf
mne.io.read_raw_gdf
mne.io.read_raw_kit
mne.io.read_raw_nedf
mne.io.read_raw_nicolet
mne.io.read_raw_hitachi
mne.io.read_raw_nirx
mne.io.read_raw_snirf
mne.io.read_raw_eeglab
mne.io.read_raw_brainvision
mne.io.read_raw_egi
mne.io.read_raw_fif
mne.io.read_raw_eximia
mne.io.read_raw_fieldtrip
mne.io.read_raw_boxy
mne.io.read_raw_persyst
mne.io.read_raw_nihon
mne.io.read_raw_fil
mne.io.read_raw_nsx
mne.io.read_raw_neuralynx
mne.io.BaseRaw
mne.io.kit.read_mrk
File I/O
mne.channel_type
mne.channel_indices_by_type
mne.get_head_surf
mne.get_meg_helmet_surf
mne.get_volume_labels_from_aseg
mne.get_volume_labels_from_src
mne.parse_config
mne.read_labels_from_annot
mne.read_bem_solution
mne.read_bem_surfaces
mne.read_cov
mne.read_dipole
mne.read_epochs
mne.read_epochs_kit
mne.read_epochs_eeglab
mne.read_epochs_fieldtrip
mne.read_events
mne.read_evokeds
mne.read_evoked_besa
mne.read_evoked_fieldtrip
mne.read_evokeds_mff
mne.read_freesurfer_lut
mne.read_forward_solution
mne.read_label
mne.read_morph_map
mne.read_proj
mne.read_reject_parameters
mne.read_source_estimate
mne.read_source_spaces
mne.read_surface
mne.read_trans
mne.read_tri
mne.write_labels_to_annot
mne.write_bem_solution
mne.write_bem_surfaces
mne.write_head_bem
mne.write_cov
mne.write_events
mne.write_evokeds
mne.write_forward_solution
mne.write_label
mne.write_proj
mne.write_source_spaces
mne.write_surface
mne.write_trans
mne.what
mne.io.read_info
mne.io.write_info
mne.io.show_fiff
mne.io.get_channel_type_constants
mne.BaseEpochs
Creating data objects from arrays
mne.EvokedArray
mne.EpochsArray
mne.io.RawArray
mne.create_info
Exporting
mne.export.export_epochs
mne.export.export_evokeds
mne.export.export_evokeds_mff
mne.export.export_raw
Datasets
mne.datasets.fetch_dataset
mne.datasets.has_dataset
mne.datasets.brainstorm.bst_auditory.data_path
mne.datasets.brainstorm.bst_resting.data_path
mne.datasets.brainstorm.bst_raw.data_path
mne.datasets.eegbci.load_data
mne.datasets.eegbci.standardize
mne.datasets.fetch_aparc_sub_parcellation
mne.datasets.fetch_fsaverage
mne.datasets.fetch_hcp_mmp_parcellation
mne.datasets.fetch_infant_template
mne.datasets.fetch_phantom
mne.datasets.fnirs_motor.data_path
mne.datasets.hf_sef.data_path
mne.datasets.kiloword.data_path
mne.datasets.limo.load_data
mne.datasets.misc.data_path
mne.datasets.mtrf.data_path
mne.datasets.multimodal.data_path
mne.datasets.opm.data_path
mne.datasets.sleep_physionet.age.fetch_data
mne.datasets.sleep_physionet.temazepam.fetch_data
mne.datasets.sample.data_path
mne.datasets.somato.data_path
mne.datasets.spm_face.data_path
mne.datasets.ucl_opm_auditory.data_path
mne.datasets.visual_92_categories.data_path
mne.datasets.phantom_kit.data_path
mne.datasets.phantom_4dbti.data_path
mne.datasets.phantom_kernel.data_path
mne.datasets.refmeg_noise.data_path
mne.datasets.ssvep.data_path
mne.datasets.erp_core.data_path
mne.datasets.epilepsy_ecog.data_path
mne.datasets.eyelink.data_path
Visualization
mne.viz.Brain
mne.viz.ClickableImage
mne.viz.EvokedField
mne.viz.Figure3D
mne.viz.add_background_image
mne.viz.centers_to_edges
mne.viz.compare_fiff
mne.viz.circular_layout
mne.viz.iter_topography
mne.viz.mne_analyze_colormap
mne.viz.plot_bem
mne.viz.plot_brain_colorbar
mne.viz.plot_bridged_electrodes
mne.viz.plot_chpi_snr
mne.viz.plot_cov
mne.viz.plot_channel_labels_circle
mne.viz.plot_ch_adjacency
mne.viz.plot_csd
mne.viz.plot_dipole_amplitudes
mne.viz.plot_dipole_locations
mne.viz.plot_drop_log
mne.viz.plot_epochs
mne.viz.plot_epochs_psd_topomap
mne.viz.plot_events
mne.viz.plot_evoked
mne.viz.plot_evoked_image
mne.viz.plot_evoked_topo
mne.viz.plot_evoked_topomap
mne.viz.plot_evoked_joint
mne.viz.plot_evoked_field
mne.viz.plot_evoked_white
mne.viz.plot_filter
mne.viz.plot_head_positions
mne.viz.plot_ideal_filter
mne.viz.plot_compare_evokeds
mne.viz.plot_ica_sources
mne.viz.plot_ica_components
mne.viz.plot_ica_properties
mne.viz.plot_ica_scores
mne.viz.plot_ica_overlay
mne.viz.plot_epochs_image
mne.viz.plot_layout
mne.viz.plot_montage
mne.viz.plot_projs_topomap
mne.viz.plot_projs_joint
mne.viz.plot_raw
mne.viz.plot_raw_psd
mne.viz.plot_regression_weights
mne.viz.plot_sensors
mne.viz.plot_snr_estimate
mne.viz.plot_source_estimates
mne.viz.link_brains
mne.viz.plot_volume_source_estimates
mne.viz.plot_vector_source_estimates
mne.viz.plot_sparse_source_estimates
mne.viz.plot_tfr_topomap
mne.viz.plot_topo_image_epochs
mne.viz.plot_topomap
mne.viz.plot_alignment
mne.viz.snapshot_brain_montage
mne.viz.plot_arrowmap
mne.viz.set_3d_backend
mne.viz.get_3d_backend
mne.viz.use_3d_backend
mne.viz.set_3d_options
mne.viz.set_3d_view
mne.viz.set_3d_title
mne.viz.create_3d_figure
mne.viz.close_3d_figure
mne.viz.close_all_3d_figures
mne.viz.get_brain_class
mne.viz.set_browser_backend
mne.viz.get_browser_backend
mne.viz.use_browser_backend
mne.viz.eyetracking.plot_gaze
mne.viz.ui_events.subscribe
mne.viz.ui_events.unsubscribe
mne.viz.ui_events.publish
mne.viz.ui_events.link
mne.viz.ui_events.unlink
mne.viz.ui_events.disable_ui_events
mne.viz.ui_events.UIEvent
mne.viz.ui_events.ColormapRange
mne.viz.ui_events.Contours
mne.viz.ui_events.FigureClosing
mne.viz.ui_events.PlaybackSpeed
mne.viz.ui_events.TimeChange
mne.viz.ui_events.VertexSelect
Preprocessing
mne.Projection
mne.compute_proj_epochs
mne.compute_proj_evoked
mne.compute_proj_raw
mne.read_proj
mne.write_proj
mne.channels.Layout
mne.channels.DigMontage
mne.channels.compute_native_head_t
mne.channels.fix_mag_coil_types
mne.channels.read_polhemus_fastscan
mne.channels.get_builtin_montages
mne.channels.make_dig_montage
mne.channels.read_dig_polhemus_isotrak
mne.channels.read_dig_captrak
mne.channels.read_dig_dat
mne.channels.read_dig_egi
mne.channels.read_dig_fif
mne.channels.read_dig_hpts
mne.channels.read_dig_localite
mne.channels.make_standard_montage
mne.channels.read_custom_montage
mne.channels.compute_dev_head_t
mne.channels.read_layout
mne.channels.find_layout
mne.channels.make_eeg_layout
mne.channels.make_grid_layout
mne.channels.find_ch_adjacency
mne.channels.get_builtin_ch_adjacencies
mne.channels.read_ch_adjacency
mne.channels.equalize_channels
mne.channels.unify_bad_channels
mne.channels.rename_channels
mne.channels.generate_2d_layout
mne.channels.make_1020_channel_selections
mne.channels.combine_channels
mne.preprocessing.ICA
mne.preprocessing.Xdawn
mne.preprocessing.EOGRegression
mne.preprocessing.annotate_amplitude
mne.preprocessing.annotate_break
mne.preprocessing.annotate_movement
mne.preprocessing.annotate_muscle_zscore
mne.preprocessing.annotate_nan
mne.preprocessing.compute_average_dev_head_t
mne.preprocessing.compute_current_source_density
mne.preprocessing.compute_bridged_electrodes
mne.preprocessing.compute_fine_calibration
mne.preprocessing.compute_maxwell_basis
mne.preprocessing.compute_proj_ecg
mne.preprocessing.compute_proj_eog
mne.preprocessing.compute_proj_hfc
mne.preprocessing.cortical_signal_suppression
mne.preprocessing.create_ecg_epochs
mne.preprocessing.create_eog_epochs
mne.preprocessing.find_bad_channels_lof
mne.preprocessing.find_bad_channels_maxwell
mne.preprocessing.find_ecg_events
mne.preprocessing.find_eog_events
mne.preprocessing.fix_stim_artifact
mne.preprocessing.ica_find_ecg_events
mne.preprocessing.ica_find_eog_events
mne.preprocessing.infomax
mne.preprocessing.interpolate_bridged_electrodes
mne.preprocessing.equalize_bads
mne.preprocessing.maxwell_filter
mne.preprocessing.maxwell_filter_prepare_emptyroom
mne.preprocessing.oversampled_temporal_projection
mne.preprocessing.peak_finder
mne.preprocessing.read_ica
mne.preprocessing.read_eog_regression
mne.preprocessing.realign_raw
mne.preprocessing.regress_artifact
mne.preprocessing.corrmap
mne.preprocessing.read_ica_eeglab
mne.preprocessing.read_fine_calibration
mne.preprocessing.write_fine_calibration
mne.preprocessing.nirs.optical_density
mne.preprocessing.nirs.beer_lambert_law
mne.preprocessing.nirs.source_detector_distances
mne.preprocessing.nirs.short_channels
mne.preprocessing.nirs.scalp_coupling_index
mne.preprocessing.nirs.temporal_derivative_distribution_repair
mne.preprocessing.ieeg.project_sensors_onto_brain
mne.preprocessing.ieeg.make_montage_volume
mne.preprocessing.ieeg.warp_montage
mne.preprocessing.eyetracking.Calibration
mne.preprocessing.eyetracking.read_eyelink_calibration
mne.preprocessing.eyetracking.set_channel_types_eyetrack
mne.preprocessing.eyetracking.convert_units
mne.preprocessing.eyetracking.get_screen_visual_angle
mne.preprocessing.eyetracking.interpolate_blinks
mne.add_reference_channels
mne.set_bipolar_reference
mne.set_eeg_reference
mne.filter.construct_iir_filter
mne.filter.create_filter
mne.filter.estimate_ringing_samples
mne.filter.filter_data
mne.filter.notch_filter
mne.filter.resample
mne.chpi.compute_chpi_amplitudes
mne.chpi.compute_chpi_snr
mne.chpi.compute_chpi_locs
mne.chpi.compute_head_pos
mne.chpi.extract_chpi_locs_ctf
mne.chpi.extract_chpi_locs_kit
mne.chpi.filter_chpi
mne.chpi.get_active_chpi
mne.chpi.get_chpi_info
mne.chpi.head_pos_to_trans_rot_t
mne.chpi.read_head_pos
mne.chpi.write_head_pos
mne.transforms.Transform
mne.transforms.quat_to_rot
mne.transforms.rot_to_quat
mne.transforms.read_ras_mni_t
Events
mne.Annotations
mne.AcqParserFIF
mne.concatenate_events
mne.count_events
mne.find_events
mne.find_stim_steps
mne.make_fixed_length_events
mne.make_fixed_length_epochs
mne.merge_events
mne.parse_config
mne.pick_events
mne.read_annotations
mne.read_events
mne.write_events
mne.concatenate_epochs
mne.events_from_annotations
mne.annotations_from_events
mne.count_annotations
mne.event.define_target_events
mne.event.match_event_names
mne.event.shift_time_events
mne.epochs.average_movements
mne.epochs.combine_event_ids
mne.epochs.equalize_epoch_counts
mne.epochs.make_metadata
Sensor Space Data
mne.combine_evoked
mne.concatenate_raws
mne.equalize_channels
mne.grand_average
mne.match_channel_orders
mne.pick_channels
mne.pick_channels_cov
mne.pick_channels_forward
mne.pick_channels_regexp
mne.pick_types
mne.pick_types_forward
mne.pick_info
mne.read_epochs
mne.read_reject_parameters
mne.read_vectorview_selection
mne.rename_channels
mne.baseline.rescale
Covariance computation
mne.Covariance
mne.compute_covariance
mne.compute_raw_covariance
mne.cov.compute_whitener
mne.cov.prepare_noise_cov
mne.cov.regularize
mne.compute_rank
mne.make_ad_hoc_cov
mne.read_cov
mne.write_cov
MRI Processing
mne.coreg.get_mni_fiducials
mne.coreg.estimate_head_mri_t
mne.io.read_fiducials
mne.io.write_fiducials
mne.get_montage_volume_labels
mne.gui.coregistration
mne.create_default_subject
mne.head_to_mni
mne.head_to_mri
mne.read_freesurfer_lut
mne.read_lta
mne.read_talxfm
mne.scale_mri
mne.scale_bem
mne.scale_labels
mne.scale_source_space
mne.transforms.apply_volume_registration
mne.transforms.apply_volume_registration_points
mne.transforms.compute_volume_registration
mne.vertex_to_mni
mne.coreg.Coregistration
Forward Modeling
mne.Forward
mne.SourceSpaces
mne.add_source_space_distances
mne.apply_forward
mne.apply_forward_raw
mne.average_forward_solutions
mne.convert_forward_solution
mne.decimate_surface
mne.dig_mri_distances
mne.forward.compute_depth_prior
mne.forward.compute_orient_prior
mne.forward.restrict_forward_to_label
mne.forward.restrict_forward_to_stc
mne.make_bem_model
mne.make_bem_solution
mne.make_forward_dipole
mne.make_forward_solution
mne.make_field_map
mne.make_sphere_model
mne.morph_source_spaces
mne.read_bem_surfaces
mne.read_forward_solution
mne.read_trans
mne.read_source_spaces
mne.read_surface
mne.sensitivity_map
mne.setup_source_space
mne.setup_volume_source_space
mne.surface.complete_surface_info
mne.surface.read_curvature
mne.use_coil_def
mne.write_bem_surfaces
mne.write_trans
mne.bem.ConductorModel
mne.bem.fit_sphere_to_headshape
mne.bem.get_fitting_dig
mne.bem.make_watershed_bem
mne.bem.make_flash_bem
mne.bem.make_scalp_surfaces
mne.bem.convert_flash_mris
mne.bem.distance_to_bem
Inverse Solutions
mne.minimum_norm.InverseOperator
mne.minimum_norm.apply_inverse
mne.minimum_norm.apply_inverse_cov
mne.minimum_norm.apply_inverse_epochs
mne.minimum_norm.apply_inverse_raw
mne.minimum_norm.apply_inverse_tfr_epochs
mne.minimum_norm.compute_source_psd
mne.minimum_norm.compute_source_psd_epochs
mne.minimum_norm.compute_rank_inverse
mne.minimum_norm.estimate_snr
mne.minimum_norm.make_inverse_operator
mne.minimum_norm.prepare_inverse_operator
mne.minimum_norm.read_inverse_operator
mne.minimum_norm.source_band_induced_power
mne.minimum_norm.source_induced_power
mne.minimum_norm.write_inverse_operator
mne.minimum_norm.make_inverse_resolution_matrix
mne.minimum_norm.resolution_metrics
mne.minimum_norm.get_cross_talk
mne.minimum_norm.get_point_spread
mne.inverse_sparse.mixed_norm
mne.inverse_sparse.tf_mixed_norm
mne.inverse_sparse.gamma_map
mne.inverse_sparse.make_stc_from_dipoles
mne.beamformer.Beamformer
mne.beamformer.read_beamformer
mne.beamformer.make_lcmv
mne.beamformer.apply_lcmv
mne.beamformer.apply_lcmv_epochs
mne.beamformer.apply_lcmv_raw
mne.beamformer.apply_lcmv_cov
mne.beamformer.make_dics
mne.beamformer.apply_dics
mne.beamformer.apply_dics_csd
mne.beamformer.apply_dics_epochs
mne.beamformer.apply_dics_tfr_epochs
mne.beamformer.rap_music
mne.beamformer.trap_music
mne.beamformer.make_lcmv_resolution_matrix
mne.Dipole
mne.DipoleFixed
mne.fit_dipole
mne.dipole.get_phantom_dipoles
Source Space Data
mne.BiHemiLabel
mne.Label
mne.MixedSourceEstimate
mne.MixedVectorSourceEstimate
mne.SourceEstimate
mne.VectorSourceEstimate
mne.VolSourceEstimate
mne.VolVectorSourceEstimate
mne.SourceMorph
mne.compute_source_morph
mne.extract_label_time_course
mne.grade_to_tris
mne.grade_to_vertices
mne.label.select_sources
mne.grow_labels
mne.label_sign_flip
mne.labels_to_stc
mne.morph_labels
mne.random_parcellation
mne.read_labels_from_annot
mne.read_dipole
mne.read_label
mne.read_source_estimate
mne.read_source_morph
mne.split_label
mne.stc_to_label
mne.stc_near_sensors
mne.transform_surface_to
mne.write_labels_to_annot
mne.write_label
mne.source_space.compute_distance_to_sensors
mne.source_space.get_decimated_surfaces
Time-Frequency
mne.time_frequency.AverageTFR
mne.time_frequency.AverageTFRArray
mne.time_frequency.BaseTFR
mne.time_frequency.EpochsTFR
mne.time_frequency.EpochsTFRArray
mne.time_frequency.RawTFR
mne.time_frequency.RawTFRArray
mne.time_frequency.CrossSpectralDensity
mne.time_frequency.Spectrum
mne.time_frequency.SpectrumArray
mne.time_frequency.EpochsSpectrum
mne.time_frequency.EpochsSpectrumArray
mne.time_frequency.csd_tfr
mne.time_frequency.csd_fourier
mne.time_frequency.csd_multitaper
mne.time_frequency.csd_morlet
mne.time_frequency.pick_channels_csd
mne.time_frequency.read_csd
mne.time_frequency.fit_iir_model_raw
mne.time_frequency.tfr_morlet
mne.time_frequency.tfr_multitaper
mne.time_frequency.tfr_stockwell
mne.time_frequency.read_tfrs
mne.time_frequency.write_tfrs
mne.time_frequency.read_spectrum
mne.time_frequency.csd_array_fourier
mne.time_frequency.csd_array_multitaper
mne.time_frequency.csd_array_morlet
mne.time_frequency.dpss_windows
mne.time_frequency.fwhm
mne.time_frequency.morlet
mne.time_frequency.stft
mne.time_frequency.istft
mne.time_frequency.stftfreq
mne.time_frequency.psd_array_multitaper
mne.time_frequency.psd_array_welch
mne.time_frequency.tfr_array_morlet
mne.time_frequency.tfr_array_multitaper
mne.time_frequency.tfr_array_stockwell
mne.time_frequency.tfr.cwt
mne.time_frequency.tfr.morlet
Connectivity Estimation
Statistics
mne.stats.ttest_1samp_no_p
mne.stats.ttest_ind_no_p
mne.stats.f_oneway
mne.stats.f_mway_rm
mne.stats.f_threshold_mway_rm
mne.stats.linear_regression
mne.stats.linear_regression_raw
mne.stats.bonferroni_correction
mne.stats.fdr_correction
mne.stats.combine_adjacency
mne.stats.permutation_cluster_test
mne.stats.permutation_cluster_1samp_test
mne.stats.permutation_t_test
mne.stats.spatio_temporal_cluster_test
mne.stats.spatio_temporal_cluster_1samp_test
mne.stats.summarize_clusters_stc
mne.stats.bootstrap_confidence_interval
mne.stats.erp.compute_sme
mne.channels.find_ch_adjacency
mne.channels.read_ch_adjacency
mne.spatial_dist_adjacency
mne.spatial_src_adjacency
mne.spatial_tris_adjacency
mne.spatial_inter_hemi_adjacency
mne.spatio_temporal_src_adjacency
mne.spatio_temporal_tris_adjacency
mne.spatio_temporal_dist_adjacency
Simulation
mne.simulation.add_chpi
mne.simulation.add_ecg
mne.simulation.add_eog
mne.simulation.add_noise
mne.simulation.simulate_evoked
mne.simulation.simulate_raw
mne.simulation.simulate_stc
mne.simulation.simulate_sparse_stc
mne.simulation.select_source_in_label
mne.simulation.SourceSimulator
mne.simulation.metrics.cosine_score
mne.simulation.metrics.region_localization_error
mne.simulation.metrics.f1_score
mne.simulation.metrics.precision_score
mne.simulation.metrics.recall_score
mne.simulation.metrics.roc_auc_score
mne.simulation.metrics.spatial_deviation_error
mne.simulation.metrics.peak_position_error
Decoding
mne.decoding.CSP
mne.decoding.EMS
mne.decoding.FilterEstimator
mne.decoding.LinearModel
mne.decoding.PSDEstimator
mne.decoding.Scaler
mne.decoding.TemporalFilter
mne.decoding.TimeFrequency
mne.decoding.UnsupervisedSpatialFilter
mne.decoding.Vectorizer
mne.decoding.ReceptiveField
mne.decoding.TimeDelayingRidge
mne.decoding.SlidingEstimator
mne.decoding.GeneralizingEstimator
mne.decoding.SPoC
mne.decoding.SSD
mne.decoding.compute_ems
mne.decoding.cross_val_multiscore
mne.decoding.get_coef
Realtime
MNE-Report
mne.Report
mne.open_report
Logging and Configuration
mne.get_config_path
mne.get_config
mne.open_docs
mne.set_log_level
mne.set_log_file
mne.set_config
mne.set_cache_dir
mne.set_memmap_min_size
mne.sys_info
mne.use_log_level
mne.verbose
mne.utils.deprecated
mne.utils.warn
mne.cuda.get_cuda_memory
mne.cuda.init_cuda
mne.cuda.set_cuda_device
mne.viz.close_all_3d_figures
#
mne.viz.
close_all_3d_figures
(
)
[source]
#
Close all the scenes of the current 3d backend.
On this page
close_all_3d_figures()
