Inverse Solutions#


Linear inverse solvers based on L2 Minimum Norm Estimates (MNE).


InverseOperator class to represent info from inverse operator.

apply_inverse(evoked, inverse_operator[, ...])

Apply inverse operator to evoked data.

apply_inverse_cov(cov, info, inverse_operator)

Apply inverse operator to covariance data.

apply_inverse_epochs(epochs, ...[, method, ...])

Apply inverse operator to Epochs.

apply_inverse_raw(raw, inverse_operator, lambda2)

Apply inverse operator to Raw data.

apply_inverse_tfr_epochs(epochs_tfr, ...[, ...])

Apply inverse operator to EpochsTFR.

compute_source_psd(raw, inverse_operator[, ...])

Compute source power spectral density (PSD).

compute_source_psd_epochs(epochs, ...[, ...])

Compute source power spectral density (PSD) from Epochs.


Compute the rank of a linear inverse operator (MNE, dSPM, etc.).

estimate_snr(evoked, inv[, verbose])

Estimate the SNR as a function of time for evoked data.

make_inverse_operator(info, forward, noise_cov)

Assemble inverse operator.

prepare_inverse_operator(orig, nave, lambda2)

Prepare an inverse operator for actually computing the inverse.

read_inverse_operator(fname, *[, verbose])

Read the inverse operator decomposition from a FIF file.

source_band_induced_power(epochs, ...[, ...])

Compute source space induced power in given frequency bands.

source_induced_power(epochs, ...[, label, ...])

Compute induced power and phase lock.

write_inverse_operator(fname, inv, *[, ...])

Write an inverse operator to a FIF file.

make_inverse_resolution_matrix(forward, ...)

Compute resolution matrix for linear inverse operator.

resolution_metrics(resmat, src[, function, ...])

Compute spatial resolution metrics for linear solvers.

get_cross_talk(resmat, src, idx[, mode, ...])

Get cross-talk (CTFs) function for vertices.

get_point_spread(resmat, src, idx[, mode, ...])

Get point-spread (PSFs) functions for vertices.


Non-Linear sparse inverse solvers.

mixed_norm(evoked, forward, noise_cov[, ...])

Mixed-norm estimate (MxNE) and iterative reweighted MxNE (irMxNE).

tf_mixed_norm(evoked, forward, noise_cov[, ...])

Time-Frequency Mixed-norm estimate (TF-MxNE).

gamma_map(evoked, forward, noise_cov, alpha)

Hierarchical Bayes (Gamma-MAP) sparse source localization method.

make_stc_from_dipoles(dipoles, src[, verbose])

Convert a list of spatio-temporal dipoles into a SourceEstimate.


Beamformers for source localization.


A computed beamformer.


Read a beamformer filter.

make_lcmv(info, forward, data_cov[, reg, ...])

Compute LCMV spatial filter.

apply_lcmv(evoked, filters, *[, verbose])

Apply Linearly Constrained Minimum Variance (LCMV) beamformer weights.

apply_lcmv_epochs(epochs, filters, *[, ...])

Apply Linearly Constrained Minimum Variance (LCMV) beamformer weights.

apply_lcmv_raw(raw, filters[, start, stop, ...])

Apply Linearly Constrained Minimum Variance (LCMV) beamformer weights.

apply_lcmv_cov(data_cov, filters[, verbose])

Apply Linearly Constrained Minimum Variance (LCMV) beamformer weights.

make_dics(info, forward, csd[, reg, ...])

Compute a Dynamic Imaging of Coherent Sources (DICS) spatial filter.

apply_dics(evoked, filters[, verbose])

Apply Dynamic Imaging of Coherent Sources (DICS) beamformer weights.

apply_dics_csd(csd, filters[, verbose])

Apply Dynamic Imaging of Coherent Sources (DICS) beamformer weights.

apply_dics_epochs(epochs, filters[, ...])

Apply Dynamic Imaging of Coherent Sources (DICS) beamformer weights.

apply_dics_tfr_epochs(epochs_tfr, filters[, ...])

Apply Dynamic Imaging of Coherent Sources (DICS) beamformer weights.

rap_music(evoked, forward, noise_cov[, ...])

RAP-MUSIC source localization method.

trap_music(evoked, forward, noise_cov[, ...])

TRAP-MUSIC source localization method.

make_lcmv_resolution_matrix(filters, ...)

Compute resolution matrix for LCMV beamformer.

Dipole(times, pos, amplitude, ori, gof[, ...])

Dipole class for sequential dipole fits.

DipoleFixed(info, data, times, nave, aspect_kind)

Dipole class for fixed-position dipole fits.

fit_dipole(evoked, cov, bem[, trans, ...])

Fit a dipole.


Single-dipole functions and classes.


Get standard phantom dipole locations and orientations.